Rocky Mountain Algebraic Combinatorics Seminar

Upcoming Seminars Schedule

Graph Traversal Edit Distance

Hamidreza Chitsaz
Colorado State University (CS)

Many problems in applied machine learning deal with graphs (also called networks), including social networks, security, web data mining, protein function prediction, and genome informatics. The kernel paradigm beautifully decouples the learning algorithm from the underlying geometric space, which renders graph kernels important for the aforementioned applications.

In this talk, we give a new graph kernel which we call graph traversal edit distance (GTED). We introduce the GTED problem and give the first polynomial time algorithm for it. Informally, the graph traversal edit distance is the minimum edit distance between two strings formed by the edge labels of respective Eulerian traversals of the two graphs. Also, GTED is motivated by and provides the first mathematical formalism for sequence co-assembly and de novo variation detection in bioinformatics.
We demonstrate that GTED admits a polynomial time algorithm using a linear program (LP) in the graph product space. We prove the LP is unimodular; hence, it is guaranteed to yield an integer solution. Our proof is based on the homology of graph product spaces. In particular, we show that the homology groups of graph product spaces are torsion free. A result of Dey-Hirani-Krishnamoorthy then gives the result.


Semi-extraspecial Groups

Mark Lewis
Kent State University

Extraspecial groups play an important role in group theory. Particularly in problems involving character degrees. We will show how how extraspecial groups can be generalized to semi-extraspecial groups. We will present some of the the basic results regarding semi-extraspecial groups. Then we focus on semi-extraspecial groups that have an abelian subgroup of maximal possible order and consider a connection with semifields.


Weber 223
4–6 pm
Friday, February 16, 2018
(Refreshments in Weber 117, 3:30–4 pm)
Colorado State University

This is a joint Denver U / UC Boulder / UC Denver / U of Wyoming / CSU seminar that meets biweekly. Anyone interested is welcome to join us at a local restaurant for dinner after the talks.

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Previous Seminars:

February 2, 2018
James B. Wilson, Anton Betten
November 10, 2017
Michael Kinyon, Petr Vojt\v{e}chovsk\'y
October 20, 2017
Eric Moorhouse, William DeMeo
October 6, 2017
Spencer Gerhardt, Joshua Grochow
September 22, 2017
Amanda Schaeffer Fry, Henry Kvinge
September 8, 2017
Peter Mayr, James B. Wilson
May 5, 2017
Ferdinand Ihringer, Gavin King
April 21, 2017
Vladimir D. Tonchev, Morgan Rodgers
April 7, 2017
Jason Williford, Anton Betten
March 24, 2017
Isabella Novik, Peter Brooksbank
March 3, 2017
Jintai Ding, Curtis Bennett
February 17, 2017
Fatma Karaoglu, Eric Moorhouse
February 3, 2017
Tim Penttila, James B. Wilson
December 2, 2016
Jim Fowler, Andrew Kelley
November 11, 2016
Joseph Gersch, Joshua Maglione
October 28, 2016
John MacLaren Walsh, Henry Adams
October 14, 2016
JM Landsberg, James B. Wilson
September 30, 2016
Alexander Hulpke, Oscar Levin
September 16, 2016
Delaram Kahrobaei, Amit Patel
June 23, 2016
Jason Cantarella, Michal Adamaszek
April 29, 2016
Nick Loehr, Jason Williford
April 15, 2016
Alexander Hulpke, Klaus Lux
April 1, 2016
Eamonn O'Brien, Izabella Stuhl
February 19, 2015
James Wilson, Anton Betten
December 4, 2015
Maria Monks Gillespie, Dane Flannery
November 13, 2015
Richard Green, Tim Penttila
October 23, 2015
Christina Boucher, Sylvia Hobart
October 9, 2015
Josh Maglione, Ghodratollah Aalipour
September 25, 2015
Ross McConnell, Henry Adams
September 11, 2015
James B. Wilson, Tim Penttila
May 8, 2015
Amanda Schaeffer Fry, Peter Brooksbank
April 24, 2015
Heide Gluesing-Luerssen, Phil DeOrsey
March 6, 2015
Felice Manganiello, Eric Moorhouse
February 20, 2015
Anton Dzhamay, Anton Betten
February 6, 2015
Alexander Hulpke, Morgan Rodgers
December 5, 2014
Stefaan De Winter, Gretchen Matthews
November 14, 2014
Greg Coxson, Tom Dorsey
October 31, 2014
Octavio Paez Osuna, Sylvia Hobart
October 10, 2014
Takunari Miyazaki, Eric Moorhouse
September 26, 2014
Elissa Ross, Anton Betten
September 12, 2014
Petr Vojtěchovský, Alexander Hulpke
May 9, 2014
Philip DeOrsey, Tim Penttila
April 25, 2014
William J Martin, Jason Williford
April 11, 2014
Victor Pambuccian, George Shakan
March 7, 2014
Nathan Lindzey, Jens Harlander
February 21, 2014
Ross McConnell, Anton Betten
November 22, 2013
Justin Hughes, Josh Maglione

Department of Mathematics
Fort Collins, Colorado 80523